Publications 2024
Journal Articles Review Articles Preprints
Journal articles
Optimizing SureQuant for Targeted Peptide Quantification: a Technical Comparison with PRM and SWATH-MS Methods
Authors: Antelo-Varela, M.*, Bumann, D., and Schmidt, A.*
Published: Analytical Chemistry 2024
DOI: 10.1021/acs.analchem.4c03622
Pseudomonas aeruginosa faces a fitness trade-off between mucosal colonization and antibiotic tolerance during airway infection
Authors: Meirelles, L.A., Vayena, E., Debache, A., Schmidt, E., Rossy, T., Distler, T., Hatzimanikatis, V., and Persat, A.
Published: Nature Microbiology 2024
DOI: 10.1038/s41564-024-01842-3
Toxin-mediated depletion of NAD and NADP drives persister formation in a human pathogen
Authors: Santi, I., Dias Teixeira, R., Manfredi, P., Hernandez Gonzalez, H., Spiess, DC., Mas, G., Klotz, A., Kaczmarczyk, A., Zamboni, N., Hiller, S., and Jenal, U.
Published: EMBO Journal 2024
DOI: 10.1038/s44318-024-00248-5
Initiation of H1-T6SS dueling between Pseudomonas aeruginosa
Authors: George, M., Narayanan, S., Tejada-Arranz, A., Plack, A., and Basler, M.
Published: mBio 2024
Transwell-based microphysiological platform for high-resolution imaging of airway tissues
Authors: Kurmashev, A., Boos, JA., Laventie, BJ., Swart, AL., Suetterlin, R., Junne, T., Jenal, U., and Hierlemann, A.
Published: Advanced Materials Technologies 2024
Pseudomonas aeruginosa breaches respiratory epithelia through goblet cell invasion in a microtissue model
Authors: Swart, AL., Laventie, BJ., Sütterlin, R., Junne, T., Lauer, L., Manfredi, P. Jakonia, S., Yu, X., Karagkiozi, E., Okujava, R., and Jenal, U.
Published: Nature Microbiology 2024
DOI: 10.1038/s41564-024-01718-6
Preprint: 10.1101/2023.08.13.553119
A genetically encoded biosensor to monitor dynamic changes of c-di-GMP with high temporal resolution
Authors: Kaczmarczyk, A., van Vliet, S., Jakob, R.P., Teixeira, R.D., Scheidat, I., Reinders, A., Klotz, A., Maier, M. and Jenal, U.
Published in: Nature Communications 2024
DOI: 10.1038/s41467-024-48295-0
Genome-wide CRISPRi screens for high-throughput fitness quantification and identification of determinants for dalbavancin susceptibility in Staphylococcus aureus
Authors: Liu, X., de Bakker, V., Heggenhougen, MV., Mårli, MT., Frøynes, AH., Salehian, Z., Porcellato, D., Morales Angeles, D., Veening, J-W.*, and Kjos, M.*
Published: mSystems 2024
DOI: 10.1128/msystems.01289-23
A Far-Red Fluorescent Probe to Visualize Gram-Positive Bacteria in Patient Samples
Authors: Jantarug, K., Tripathi, V., Morin, B., Iizuka, A., Kuehl, R., Morgenstern, M., Clauss, M., Khanna, N., Bumann, D., and Rivera-Fuentes, P.
Published in: ACS Infectious Diseases 2024
DOI: 10.1021/acsinfecdis.4c00060
In Vivo Microrheology Reveals Local Elastic and Plastic Responses Inside 3D Bacterial Biofilms
Authors: Ohmura, T., Skinner, DJ., Neuhaus, K., Choi, GPT., Dunkel, J.*, and Knut Drescher, K.*
Published in: Advanced Materials 2024
In situ analysis of osmolyte mechanisms of proteome thermal stabilization
Authors: Pepelnjak, M., Velten, B., Näpflin, N., von Rosen, T., Palmiero, U.C., Ko, J.H., Maynard, H.D., Arosio, P., Weber-Ban, E., de Souza, N., Huber W., and Picotti, P.
Published in: Nature Chemical Biology 2024
DOI: 10.1038/s41589-024-01568-7
Complete genome sequence of Pseudomonas aeruginosa phage Knedl
Authors: Maffei, E., Manner, C., Jenal, U., and Harms, A.
Published in: Microbiology Resource Announcements 2024
DOI: 10.1128/mra.01174-23
Phage Paride can kill dormant, antibiotic-tolerant cells of Pseudomonas aeruginosa by direct lytic replication
Authors: Maffei, E., Woischnig, A., Burkolter, M., Heyer, Humolli, D., Thürkauf, N., Bock, T., Y., Schmidt, A., Manfredi, P., Egli, A., Khanna, N., Jenal, U., and Harms, A.
Published in: Nature Communications 2024
DOI: 10.1038/s41467-023-44157-3
Review articles
Sophisticated natural products as antibiotics
Review
Authors: Lewis, K.*, Lee, R.E.*, Brötz-Oesterhelt, H., Hiller, S., Rodnina, M.V., Schneider, T., Weingarth, M. and Wohlgemuth, I.
Published in: Nature 2024
DOI: 10.1038/s41586-024-07530-w
Open microfluidics: droplet microarrays as next generation multiwell plates for high throughput screening
Perspective
Authors: Strutt, R., Xiong, B., Abegga, V.F., and Dittrich, P.S.
Published in: Lab Chip 2024
DOI: doi.org/10.1039/D3LC01024D
Revitalizing antibiotic discovery and development through in-vitro modelling of in-patient infection conditions
Comment
Authors: Sollier, J., Basler, M., Broz, P., Dittrich, PS., Drescher, K., Egli, A., Harms, A., Hierlemann, A., Hiller, S., King, CG., McKinney, JD., Moran-Gilad, J., Neher, RA., Page, MGP., Panke, S., Persat, A., Picotti, P., Rentsch, KM., Rivera-Fuentes, P., Sauer, U., Stolz, D., Tschudin-Sutter, S., van Delden, C., van Nimwegen, E., Veening, J.W., Zampieri, M. Zinkernagel, AS., Khanna, N., Bumann, D., Jenal. J., and Dehio, C.
Published in: Nature Microbiology 2024
DOI: 10.1038/s41564-023-01566-w
Free access to the article: https://edoc.unibas.ch/96596/