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Dataset Spotlight

Dataset Spotlight is a monthly feature in the NCCR AntiResist newsletter, Breaking Bact. Each month, the information is uploaded to this page as well, so that you can keep track of all the featured datasets.

Dataset Spotlight

February 2024

Our February 2024 spotlight is on the 92 sequenced genomes » of Pseudomonas aeruginosa clinical isolates, submitted to the Data Catalog by Pablo Manfredi. These datasets were entered into the catalog via the API.

See the dataset »

March 2024

March 2024‘s Dataset Spotlight is shining in multi-channel fluorescence on the microscopy dataset “Imaging of a human bronchial organoid model during infection with Pseudomonas aeruginosa” from the Jenal lab, submitted to the Data Catalog by Benoît Laventie.

The dataset consists of images collected from light microscopy, SEM and TEM underlying a publication currently under review. The raw image files (nearly 3 Tb of data!) have been deposited in the EMBL-EBI BioImage Archive, and the link to the public deposition will be available in the catalog entry once the article is published.

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April 2024

The April 2024 Dataset Spotlight highlights the proteomics dataset “Proteome of PnorC reporter-sorted P. aeruginosa PAO1 cells” from the Basler lab, submitted by Alejandro Tejada Arranz.

Resources associated with the dataset include differential expression analysis and the LFQ analysis report from the Proteomics Core Facility at the Biozentrum.

We are already looking forward to the NCCR AntiResist retreat in May, where we will hold a dataset raffle drawing. Submit your dataset to the catalog by May 1 for a chance to win a prize!

See the dataset »

Escherichia Coli image